Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC087623.3-201ENST00000607047 1098 ntBASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA1Q9UND3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA1Q9UND3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA1Q9UND3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA1Q9UND3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.35■□□□□ 0.85
NPIPA1Q9UND3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.35■□□□□ 0.85
NPIPA1Q9UND3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA1Q9UND3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA1Q9UND3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NPIPA1Q9UND3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NPIPA1Q9UND3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPIPA1Q9UND3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA1Q9UND3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NPIPA1Q9UND3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPA1Q9UND3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 AL162430.1-201ENST00000480705 870 ntBASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.29■□□□□ 0.84
NPIPA1Q9UND3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms