Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF346Q9UL40 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF346Q9UL40 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 UNC93B8-201ENST00000511903 705 ntBASIC19.86■□□□□ 0.77
ZNF346Q9UL40 DUX4L4-201ENST00000566884 1269 ntBASIC19.86■□□□□ 0.77
ZNF346Q9UL40 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 LINC00565-201ENST00000562710 2331 ntBASIC19.86■□□□□ 0.77
ZNF346Q9UL40 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF346Q9UL40 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ZNF346Q9UL40 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF346Q9UL40 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF346Q9UL40 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ZNF346Q9UL40 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF346Q9UL40 ECEL1P1-201ENST00000373592 1742 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF346Q9UL40 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZNF346Q9UL40 AL356441.2-201ENST00000443009 864 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 MIR6724-1-201ENST00000616420 92 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 MIR6724-2-201ENST00000616483 92 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 MIR6724-4-201ENST00000617390 92 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 MIR6724-3-201ENST00000622482 92 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF346Q9UL40 AC127496.7-201ENST00000625110 1798 ntBASIC19.82■□□□□ 0.76
ZNF346Q9UL40 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms