Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RPUSD1Q9UJJ7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.39■□□□□ 0.53
RPUSD1Q9UJJ7 MIR4767-201ENST00000582827 78 ntBASIC18.39■□□□□ 0.53
RPUSD1Q9UJJ7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RPUSD1Q9UJJ7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.39■□□□□ 0.53
RPUSD1Q9UJJ7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPUSD1Q9UJJ7 AC068473.5-201ENST00000616428 2072 ntBASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
RPUSD1Q9UJJ7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 AC005837.3-201ENST00000612163 286 ntBASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 AC133637.1-201ENST00000624115 1537 ntBASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.37■□□□□ 0.53
RPUSD1Q9UJJ7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 AL355001.2-201ENST00000620617 1191 ntBASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 C9orf163-202ENST00000624034 2573 ntBASIC18.36■□□□□ 0.53
RPUSD1Q9UJJ7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 AC012676.1-201ENST00000574705 1949 ntBASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPUSD1Q9UJJ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 AL031432.3-201ENST00000607698 485 ntBASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPUSD1Q9UJJ7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPUSD1Q9UJJ7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.33■□□□□ 0.53
RPUSD1Q9UJJ7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPUSD1Q9UJJ7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
RPUSD1Q9UJJ7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPUSD1Q9UJJ7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms