Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSFQ9UBX1 AC026271.2-201ENST00000428091 497 ntBASIC20.87■□□□□ 0.93
CTSFQ9UBX1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.87■□□□□ 0.93
CTSFQ9UBX1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTSFQ9UBX1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.87■□□□□ 0.93
CTSFQ9UBX1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTSFQ9UBX1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSFQ9UBX1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTSFQ9UBX1 AC004687.1-201ENST00000579003 1625 ntBASIC20.86■□□□□ 0.93
CTSFQ9UBX1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSFQ9UBX1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSFQ9UBX1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.85■□□□□ 0.93
CTSFQ9UBX1 IGHV3-19-201ENST00000521488 291 ntBASIC20.85■□□□□ 0.93
CTSFQ9UBX1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CTSFQ9UBX1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTSFQ9UBX1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.85■□□□□ 0.93
CTSFQ9UBX1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 ANOS2P-203ENST00000472227 1816 ntBASIC20.84■□□□□ 0.93
CTSFQ9UBX1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTSFQ9UBX1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.83■□□□□ 0.93
CTSFQ9UBX1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSFQ9UBX1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSFQ9UBX1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTSFQ9UBX1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
CTSFQ9UBX1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSFQ9UBX1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSFQ9UBX1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.83■□□□□ 0.92
CTSFQ9UBX1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTSFQ9UBX1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CTSFQ9UBX1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSFQ9UBX1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.8■□□□□ 0.92
CTSFQ9UBX1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms