Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 AC073130.3-201ENST00000624389 2278 ntBASIC28.4■■■□□ 2.14
PPP4R2Q9NY27 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC28.4■■■□□ 2.14
PPP4R2Q9NY27 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
PPP4R2Q9NY27 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R2Q9NY27 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.4■■■□□ 2.14
PPP4R2Q9NY27 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R2Q9NY27 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PPP4R2Q9NY27 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PPP4R2Q9NY27 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC28.39■■■□□ 2.13
PPP4R2Q9NY27 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC28.38■■■□□ 2.13
PPP4R2Q9NY27 LONRF2P2-201ENST00000439212 571 ntBASIC28.38■■■□□ 2.13
PPP4R2Q9NY27 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.38■■■□□ 2.13
PPP4R2Q9NY27 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PPP4R2Q9NY27 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.37■■■□□ 2.13
PPP4R2Q9NY27 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R2Q9NY27 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R2Q9NY27 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R2Q9NY27 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R2Q9NY27 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC28.36■■■□□ 2.13
PPP4R2Q9NY27 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R2Q9NY27 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PPP4R2Q9NY27 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPP4R2Q9NY27 GPX1-201ENST00000419349 1106 ntBASIC28.33■■■□□ 2.13
PPP4R2Q9NY27 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPP4R2Q9NY27 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 AL592293.1-201ENST00000502889 1188 ntBASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.32■■■□□ 2.12
PPP4R2Q9NY27 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC28.31■■■□□ 2.12
PPP4R2Q9NY27 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R2Q9NY27 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 MIR6765-201ENST00000614092 87 ntBASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
PPP4R2Q9NY27 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC28.28■■■□□ 2.12
PPP4R2Q9NY27 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms