Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNMB3Q9NPA1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 EDA-201ENST00000338901 1233 ntBASIC25■■□□□ 1.59
KCNMB3Q9NPA1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25■■□□□ 1.59
KCNMB3Q9NPA1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 OR2I1P-207ENST00000453522 948 ntBASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KCNMB3Q9NPA1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KCNMB3Q9NPA1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 SUDS3P1-201ENST00000505831 966 ntBASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
KCNMB3Q9NPA1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 AP001330.3-201ENST00000520123 633 ntBASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 AL355001.2-201ENST00000620617 1191 ntBASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
KCNMB3Q9NPA1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.95■■□□□ 1.59
KCNMB3Q9NPA1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.95■■□□□ 1.59
KCNMB3Q9NPA1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
KCNMB3Q9NPA1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
KCNMB3Q9NPA1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.95■■□□□ 1.58
KCNMB3Q9NPA1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
KCNMB3Q9NPA1 SLC47A1P1-202ENST00000449666 945 ntBASIC24.95■■□□□ 1.58
KCNMB3Q9NPA1 AC010525.1-201ENST00000585559 441 ntBASIC24.95■■□□□ 1.58
KCNMB3Q9NPA1 AC005837.3-201ENST00000612163 286 ntBASIC24.95■■□□□ 1.58
KCNMB3Q9NPA1 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.95■■□□□ 1.58
KCNMB3Q9NPA1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 MIR939-201ENST00000401314 82 ntBASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 BX842568.3-201ENST00000418104 571 ntBASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
KCNMB3Q9NPA1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNMB3Q9NPA1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 AL136967.2-201ENST00000623968 743 ntBASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNMB3Q9NPA1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms