Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEC22CQ9BRL7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC22CQ9BRL7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.71■□□□□ 0.59
SEC22CQ9BRL7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.71■□□□□ 0.59
SEC22CQ9BRL7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEC22CQ9BRL7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC22CQ9BRL7 AC010542.4-201ENST00000563151 1910 ntBASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC22CQ9BRL7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SEC22CQ9BRL7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC22CQ9BRL7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 SMPD5-203ENST00000639008 1464 ntBASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC22CQ9BRL7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 AF106564.1-201ENST00000607058 2553 ntBASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 AC090877.2-201ENST00000558441 1738 ntBASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC22CQ9BRL7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 AL157384.1-201ENST00000445995 2473 ntBASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
SEC22CQ9BRL7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SEC22CQ9BRL7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC22CQ9BRL7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms