Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.81■□□□□ 0.6
CMSS1Q9BQ75 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMSS1Q9BQ75 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMSS1Q9BQ75 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 AC137767.1-201ENST00000602918 1920 ntBASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CMSS1Q9BQ75 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 AC004987.1-201ENST00000428627 508 ntBASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 ATP5G2P3-201ENST00000429083 425 ntBASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 PVT1_1.1-201ENST00000615125 194 ntBASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMSS1Q9BQ75 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CMSS1Q9BQ75 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CMSS1Q9BQ75 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.77■□□□□ 0.59
CMSS1Q9BQ75 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CMSS1Q9BQ75 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 AC010980.1-201ENST00000587192 1142 ntBASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms