Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXC2Q99958 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXC2Q99958 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXC2Q99958 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXC2Q99958 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXC2Q99958 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXC2Q99958 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
FOXC2Q99958 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXC2Q99958 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXC2Q99958 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXC2Q99958 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXC2Q99958 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXC2Q99958 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
FOXC2Q99958 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXC2Q99958 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXC2Q99958 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXC2Q99958 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXC2Q99958 FAM201B-201ENST00000458407 597 ntBASIC18.72■□□□□ 0.59
FOXC2Q99958 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXC2Q99958 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXC2Q99958 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXC2Q99958 SLC6A10P-202ENST00000431994 2058 ntBASIC18.72■□□□□ 0.59
FOXC2Q99958 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXC2Q99958 FP325331.1-202ENST00000623531 1380 ntBASIC18.71■□□□□ 0.59
FOXC2Q99958 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXC2Q99958 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXC2Q99958 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXC2Q99958 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXC2Q99958 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXC2Q99958 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXC2Q99958 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXC2Q99958 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.71■□□□□ 0.58
FOXC2Q99958 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
FOXC2Q99958 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.71■□□□□ 0.58
FOXC2Q99958 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXC2Q99958 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXC2Q99958 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FOXC2Q99958 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 TSPY6P-201ENST00000448518 926 ntBASIC18.7■□□□□ 0.58
FOXC2Q99958 AC093827.2-201ENST00000512654 315 ntBASIC18.7■□□□□ 0.58
FOXC2Q99958 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXC2Q99958 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXC2Q99958 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXC2Q99958 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXC2Q99958 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FOXC2Q99958 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXC2Q99958 BX005040.4-201ENST00000637145 1518 ntBASIC18.69■□□□□ 0.58
FOXC2Q99958 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXC2Q99958 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FOXC2Q99958 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
FOXC2Q99958 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXC2Q99958 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXC2Q99958 AC083906.2-201ENST00000511578 360 ntBASIC18.68■□□□□ 0.58
FOXC2Q99958 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXC2Q99958 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXC2Q99958 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXC2Q99958 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXC2Q99958 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
FOXC2Q99958 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FOXC2Q99958 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXC2Q99958 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXC2Q99958 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXC2Q99958 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
FOXC2Q99958 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXC2Q99958 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXC2Q99958 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXC2Q99958 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXC2Q99958 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXC2Q99958 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXC2Q99958 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXC2Q99958 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
FOXC2Q99958 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXC2Q99958 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FOXC2Q99958 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FOXC2Q99958 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms