Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC6A7Q99884 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A7Q99884 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A7Q99884 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A7Q99884 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 AC007375.3-201ENST00000600936 2314 ntBASIC19.19■□□□□ 0.66
SLC6A7Q99884 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A7Q99884 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC6A7Q99884 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC6A7Q99884 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC6A7Q99884 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC6A7Q99884 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC6A7Q99884 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A7Q99884 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC6A7Q99884 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A7Q99884 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC6A7Q99884 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A7Q99884 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A7Q99884 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC6A7Q99884 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC6A7Q99884 AC131281.2-201ENST00000520478 145 ntBASIC19.17■□□□□ 0.66
SLC6A7Q99884 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A7Q99884 MTDHP2-201ENST00000601468 714 ntBASIC19.17■□□□□ 0.66
SLC6A7Q99884 AC010997.5-201ENST00000609182 354 ntBASIC19.17■□□□□ 0.66
SLC6A7Q99884 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A7Q99884 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A7Q99884 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A7Q99884 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A7Q99884 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A7Q99884 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A7Q99884 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A7Q99884 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
SLC6A7Q99884 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A7Q99884 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A7Q99884 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A7Q99884 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A7Q99884 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A7Q99884 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms