Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE4Q96A23 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE4Q96A23 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE4Q96A23 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPNE4Q96A23 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE4Q96A23 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE4Q96A23 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE4Q96A23 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE4Q96A23 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE4Q96A23 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.84■□□□□ 0.77
CPNE4Q96A23 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE4Q96A23 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE4Q96A23 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE4Q96A23 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE4Q96A23 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
CPNE4Q96A23 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CPNE4Q96A23 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.83■□□□□ 0.77
CPNE4Q96A23 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE4Q96A23 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CPNE4Q96A23 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE4Q96A23 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE4Q96A23 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CPNE4Q96A23 AC005837.3-201ENST00000612163 286 ntBASIC19.83■□□□□ 0.77
CPNE4Q96A23 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.83■□□□□ 0.77
CPNE4Q96A23 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CPNE4Q96A23 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE4Q96A23 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE4Q96A23 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.83■□□□□ 0.76
CPNE4Q96A23 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE4Q96A23 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE4Q96A23 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE4Q96A23 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CPNE4Q96A23 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.82■□□□□ 0.76
CPNE4Q96A23 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE4Q96A23 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE4Q96A23 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 DUSP8P3-201ENST00000399571 1760 ntBASIC19.82■□□□□ 0.76
CPNE4Q96A23 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE4Q96A23 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 OR2I1P-207ENST00000453522 948 ntBASIC19.81■□□□□ 0.76
CPNE4Q96A23 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.81■□□□□ 0.76
CPNE4Q96A23 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.81■□□□□ 0.76
CPNE4Q96A23 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.81■□□□□ 0.76
CPNE4Q96A23 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CPNE4Q96A23 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CPNE4Q96A23 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE4Q96A23 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE4Q96A23 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE4Q96A23 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE4Q96A23 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE4Q96A23 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 BX842568.3-201ENST00000418104 571 ntBASIC19.8■□□□□ 0.76
CPNE4Q96A23 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
CPNE4Q96A23 AC142381.2-201ENST00000566120 298 ntBASIC19.8■□□□□ 0.76
CPNE4Q96A23 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE4Q96A23 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.8■□□□□ 0.76
CPNE4Q96A23 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE4Q96A23 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE4Q96A23 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE4Q96A23 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CPNE4Q96A23 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE4Q96A23 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPNE4Q96A23 AP001330.3-201ENST00000520123 633 ntBASIC19.79■□□□□ 0.76
CPNE4Q96A23 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.79■□□□□ 0.76
CPNE4Q96A23 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPNE4Q96A23 AL031432.3-201ENST00000607698 485 ntBASIC19.79■□□□□ 0.76
CPNE4Q96A23 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE4Q96A23 AC004687.1-201ENST00000579003 1625 ntBASIC19.79■□□□□ 0.76
CPNE4Q96A23 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE4Q96A23 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms