Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.86■■□□□ 1.09
SKA2Q8WVK7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SKA2Q8WVK7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 AC131281.2-201ENST00000520478 145 ntBASIC21.84■■□□□ 1.09
SKA2Q8WVK7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
SKA2Q8WVK7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 AL512631.2-201ENST00000604634 923 ntBASIC21.83■■□□□ 1.09
SKA2Q8WVK7 AC009086.3-201ENST00000623486 1008 ntBASIC21.83■■□□□ 1.09
SKA2Q8WVK7 AC241377.3-202ENST00000626088 1088 ntBASIC21.83■■□□□ 1.09
SKA2Q8WVK7 AC241585.3-202ENST00000628937 1088 ntBASIC21.83■■□□□ 1.09
SKA2Q8WVK7 AC245100.8-202ENST00000629247 1058 ntBASIC21.83■■□□□ 1.09
SKA2Q8WVK7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SKA2Q8WVK7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SKA2Q8WVK7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 AC099791.2-201ENST00000605725 427 ntBASIC21.82■■□□□ 1.08
SKA2Q8WVK7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.82■■□□□ 1.08
SKA2Q8WVK7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.81■■□□□ 1.08
SKA2Q8WVK7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 MIR4466-201ENST00000606121 54 ntBASIC21.81■■□□□ 1.08
SKA2Q8WVK7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKA2Q8WVK7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 AL136116.3-201ENST00000402907 1138 ntBASIC21.8■■□□□ 1.08
SKA2Q8WVK7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 DUX4L4-201ENST00000566884 1269 ntBASIC21.8■■□□□ 1.08
SKA2Q8WVK7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SKA2Q8WVK7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 AC008406.3-201ENST00000620001 1374 ntBASIC21.79■■□□□ 1.08
SKA2Q8WVK7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms