Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 MIR6084-201ENST00000622012 110 ntBASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 AL358852.1-201ENST00000623174 1268 ntBASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 AC144652.1-201ENST00000609974 1624 ntBASIC23.3■■□□□ 1.32
SHKBP1Q8TBC3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.29■■□□□ 1.32
SHKBP1Q8TBC3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 AC027612.3-201ENST00000413684 1047 ntBASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.28■■□□□ 1.32
SHKBP1Q8TBC3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 AC012414.1-201ENST00000556676 535 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L2-201ENST00000561772 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L6-201ENST00000626483 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L1-201ENST00000627662 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L8-201ENST00000629013 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L3-201ENST00000630187 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L7-201ENST00000630678 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 DUX4L5-201ENST00000630834 1275 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 LINC01529-204ENST00000636474 1715 ntBASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SHKBP1Q8TBC3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
SHKBP1Q8TBC3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 KRT18P5-201ENST00000436075 1291 ntBASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SHKBP1Q8TBC3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.24■■□□□ 1.31
SHKBP1Q8TBC3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms