Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NUP43Q8NFH3 AL117328.2-201ENST00000624617 1940 ntBASIC20.7■□□□□ 0.91
NUP43Q8NFH3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.7■□□□□ 0.91
NUP43Q8NFH3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
NUP43Q8NFH3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.7■□□□□ 0.9
NUP43Q8NFH3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 MIR3621-201ENST00000580529 85 ntBASIC20.7■□□□□ 0.9
NUP43Q8NFH3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NUP43Q8NFH3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 AL356441.2-201ENST00000443009 864 ntBASIC20.69■□□□□ 0.9
NUP43Q8NFH3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP43Q8NFH3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP43Q8NFH3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP43Q8NFH3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 GUSBP5-202ENST00000510805 1989 ntBASIC20.66■□□□□ 0.9
NUP43Q8NFH3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP43Q8NFH3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP43Q8NFH3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP43Q8NFH3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP43Q8NFH3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP43Q8NFH3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NUP43Q8NFH3 AC241377.3-202ENST00000626088 1088 ntBASIC20.65■□□□□ 0.9
NUP43Q8NFH3 AC241585.3-202ENST00000628937 1088 ntBASIC20.65■□□□□ 0.9
NUP43Q8NFH3 AC245100.8-202ENST00000629247 1058 ntBASIC20.65■□□□□ 0.9
NUP43Q8NFH3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP43Q8NFH3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUP43Q8NFH3 AC004687.1-201ENST00000579003 1625 ntBASIC20.64■□□□□ 0.9
NUP43Q8NFH3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NUP43Q8NFH3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP43Q8NFH3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUP43Q8NFH3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms