Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.18■■□□□ 1.78
SLC44A5Q8NCS7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 ANOS2P-203ENST00000472227 1816 ntBASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 MIR5787-201ENST00000611784 55 ntBASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC44A5Q8NCS7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC44A5Q8NCS7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 MIR6084-201ENST00000622012 110 ntBASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 AL031602.1-201ENST00000633169 911 ntBASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLC44A5Q8NCS7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 AC093323.1-202ENST00000635031 2045 ntBASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.14■■□□□ 1.78
SLC44A5Q8NCS7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SLC44A5Q8NCS7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.14■■□□□ 1.77
SLC44A5Q8NCS7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
SLC44A5Q8NCS7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SLC44A5Q8NCS7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC44A5Q8NCS7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 MIR572-201ENST00000384983 95 ntBASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A5Q8NCS7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SLC44A5Q8NCS7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 AP005435.1-201ENST00000529293 1178 ntBASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A5Q8NCS7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms