Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.47■□□□□ 0.87
VRK2Q86Y07 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
VRK2Q86Y07 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VRK2Q86Y07 LINC00526-201ENST00000581067 1875 ntBASIC20.47■□□□□ 0.87
VRK2Q86Y07 ECEL1P1-201ENST00000373592 1742 ntBASIC20.47■□□□□ 0.87
VRK2Q86Y07 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VRK2Q86Y07 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.46■□□□□ 0.87
VRK2Q86Y07 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
VRK2Q86Y07 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VRK2Q86Y07 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VRK2Q86Y07 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VRK2Q86Y07 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VRK2Q86Y07 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VRK2Q86Y07 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
VRK2Q86Y07 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
VRK2Q86Y07 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.45■□□□□ 0.86
VRK2Q86Y07 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.45■□□□□ 0.86
VRK2Q86Y07 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VRK2Q86Y07 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 AC127496.7-201ENST00000625110 1798 ntBASIC20.44■□□□□ 0.86
VRK2Q86Y07 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.44■□□□□ 0.86
VRK2Q86Y07 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
VRK2Q86Y07 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.44■□□□□ 0.86
VRK2Q86Y07 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.44■□□□□ 0.86
VRK2Q86Y07 DUX4L4-201ENST00000566884 1269 ntBASIC20.44■□□□□ 0.86
VRK2Q86Y07 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.44■□□□□ 0.86
VRK2Q86Y07 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VRK2Q86Y07 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VRK2Q86Y07 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.43■□□□□ 0.86
VRK2Q86Y07 AC087742.1-201ENST00000575880 1738 ntBASIC20.43■□□□□ 0.86
VRK2Q86Y07 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 AC242852.2-201ENST00000615738 1807 ntBASIC20.43■□□□□ 0.86
VRK2Q86Y07 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VRK2Q86Y07 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VRK2Q86Y07 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK2Q86Y07 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
VRK2Q86Y07 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 LINC00565-201ENST00000562710 2331 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
VRK2Q86Y07 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VRK2Q86Y07 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.41■□□□□ 0.86
VRK2Q86Y07 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.41■□□□□ 0.86
VRK2Q86Y07 MIR6724-1-201ENST00000616420 92 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 MIR6724-2-201ENST00000616483 92 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 MIR6724-4-201ENST00000617390 92 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 MIR6724-3-201ENST00000622482 92 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 AL035685.1-201ENST00000636663 812 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 C17orf82-201ENST00000623772 1530 ntBASIC20.41■□□□□ 0.86
VRK2Q86Y07 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.41■□□□□ 0.86
VRK2Q86Y07 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK2Q86Y07 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.41■□□□□ 0.86
VRK2Q86Y07 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VRK2Q86Y07 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VRK2Q86Y07 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VRK2Q86Y07 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.4■□□□□ 0.86
VRK2Q86Y07 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms