Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 AL353803.4-201ENST00000565882 1934 ntBASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL55Q7Z7F7 AC005703.6-201ENST00000623265 1329 ntBASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.16□□□□□ -0.14
MRPL55Q7Z7F7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 AC021242.3-201ENST00000607598 1377 ntBASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 MIR6722-201ENST00000617286 78 ntBASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MRPL55Q7Z7F7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 KRT125P-201ENST00000546827 989 ntBASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 AC144652.1-201ENST00000609974 1624 ntBASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
MRPL55Q7Z7F7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
MRPL55Q7Z7F7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 ESRRAP2-201ENST00000418437 1549 ntBASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.12□□□□□ -0.15
MRPL55Q7Z7F7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms