Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.03□□□□□ -0.16
LINC00575Q6W349 RNF166-209ENST00000567844 633 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 FAM99A-202ENST00000538190 1989 ntBASIC14.03□□□□□ -0.16
LINC00575Q6W349 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00575Q6W349 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00575Q6W349 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00575Q6W349 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00575Q6W349 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00575Q6W349 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00575Q6W349 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LINC00575Q6W349 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00575Q6W349 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00575Q6W349 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00575Q6W349 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00575Q6W349 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 AC092296.2-201ENST00000589470 999 ntBASIC14.01□□□□□ -0.17
LINC00575Q6W349 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00575Q6W349 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00575Q6W349 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00575Q6W349 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00575Q6W349 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00575Q6W349 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00575Q6W349 CR559946.2-201ENST00000623684 991 ntBASIC14□□□□□ -0.17
LINC00575Q6W349 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00575Q6W349 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 ECEL1P2-201ENST00000461596 1295 ntBASIC13.99□□□□□ -0.17
LINC00575Q6W349 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00575Q6W349 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00575Q6W349 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00575Q6W349 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 AC010542.4-201ENST00000563151 1910 ntBASIC13.98□□□□□ -0.17
LINC00575Q6W349 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms