Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST3H3Q16695 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H3Q16695 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H3Q16695 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST3H3Q16695 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.59■□□□□ 0.73
HIST3H3Q16695 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H3Q16695 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H3Q16695 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HIST3H3Q16695 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H3Q16695 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H3Q16695 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST3H3Q16695 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HIST3H3Q16695 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H3Q16695 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H3Q16695 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H3Q16695 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H3Q16695 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST3H3Q16695 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST3H3Q16695 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST3H3Q16695 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.58■□□□□ 0.72
HIST3H3Q16695 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST3H3Q16695 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST3H3Q16695 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 AC233723.2-201ENST00000623798 2106 ntBASIC19.57■□□□□ 0.72
HIST3H3Q16695 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 AC099791.2-201ENST00000605725 427 ntBASIC19.57■□□□□ 0.72
HIST3H3Q16695 MIR4466-201ENST00000606121 54 ntBASIC19.57■□□□□ 0.72
HIST3H3Q16695 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST3H3Q16695 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H3Q16695 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HIST3H3Q16695 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H3Q16695 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H3Q16695 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H3Q16695 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H3Q16695 AC006455.2-201ENST00000429931 906 ntBASIC19.56■□□□□ 0.72
HIST3H3Q16695 SRD5A1P1-201ENST00000442297 786 ntBASIC19.56■□□□□ 0.72
HIST3H3Q16695 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H3Q16695 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H3Q16695 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H3Q16695 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HIST3H3Q16695 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H3Q16695 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
HIST3H3Q16695 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H3Q16695 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HIST3H3Q16695 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H3Q16695 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.55■□□□□ 0.72
HIST3H3Q16695 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H3Q16695 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.55■□□□□ 0.72
HIST3H3Q16695 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.55■□□□□ 0.72
HIST3H3Q16695 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H3Q16695 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.55■□□□□ 0.72
HIST3H3Q16695 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H3Q16695 AC004687.1-201ENST00000579003 1625 ntBASIC19.54■□□□□ 0.72
HIST3H3Q16695 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 AC087742.1-201ENST00000575880 1738 ntBASIC19.54■□□□□ 0.72
HIST3H3Q16695 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 AC131281.2-201ENST00000520478 145 ntBASIC19.54■□□□□ 0.72
HIST3H3Q16695 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H3Q16695 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIST3H3Q16695 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST3H3Q16695 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST3H3Q16695 AC127496.7-201ENST00000625110 1798 ntBASIC19.53■□□□□ 0.72
HIST3H3Q16695 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST3H3Q16695 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HIST3H3Q16695 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST3H3Q16695 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST3H3Q16695 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.53■□□□□ 0.72
HIST3H3Q16695 AC092171.4-201ENST00000609130 632 ntBASIC19.53■□□□□ 0.72
HIST3H3Q16695 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST3H3Q16695 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST3H3Q16695 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms