Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SKP1P63208 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21■□□□□ 0.95
SKP1P63208 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21■□□□□ 0.95
SKP1P63208 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21■□□□□ 0.95
SKP1P63208 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21■□□□□ 0.95
SKP1P63208 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SKP1P63208 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SKP1P63208 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SKP1P63208 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SKP1P63208 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21■□□□□ 0.95
SKP1P63208 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21■□□□□ 0.95
SKP1P63208 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.99■□□□□ 0.95
SKP1P63208 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.99■□□□□ 0.95
SKP1P63208 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.99■□□□□ 0.95
SKP1P63208 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SKP1P63208 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SKP1P63208 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.99■□□□□ 0.95
SKP1P63208 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.99■□□□□ 0.95
SKP1P63208 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.99■□□□□ 0.95
SKP1P63208 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.99■□□□□ 0.95
SKP1P63208 DUSP8P3-201ENST00000399571 1760 ntBASIC20.99■□□□□ 0.95
SKP1P63208 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SKP1P63208 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SKP1P63208 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SKP1P63208 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SKP1P63208 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SKP1P63208 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 MIR4767-201ENST00000582827 78 ntBASIC20.98■□□□□ 0.95
SKP1P63208 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SKP1P63208 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SKP1P63208 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.97■□□□□ 0.95
SKP1P63208 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SKP1P63208 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.97■□□□□ 0.95
SKP1P63208 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SKP1P63208 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.97■□□□□ 0.95
SKP1P63208 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.97■□□□□ 0.95
SKP1P63208 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.97■□□□□ 0.95
SKP1P63208 AL355001.2-201ENST00000620617 1191 ntBASIC20.97■□□□□ 0.95
SKP1P63208 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.97■□□□□ 0.95
SKP1P63208 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SKP1P63208 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SKP1P63208 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SKP1P63208 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SKP1P63208 OR2I1P-207ENST00000453522 948 ntBASIC20.96■□□□□ 0.95
SKP1P63208 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SKP1P63208 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SKP1P63208 DUSP8P5-201ENST00000422884 1815 ntBASIC20.96■□□□□ 0.95
SKP1P63208 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.96■□□□□ 0.95
SKP1P63208 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
SKP1P63208 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
SKP1P63208 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SKP1P63208 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SKP1P63208 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.96■□□□□ 0.95
SKP1P63208 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SKP1P63208 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
SKP1P63208 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
SKP1P63208 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.95■□□□□ 0.94
SKP1P63208 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.95■□□□□ 0.94
SKP1P63208 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SKP1P63208 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SKP1P63208 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SKP1P63208 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.94■□□□□ 0.94
SKP1P63208 AC027682.1-201ENST00000562846 899 ntBASIC20.94■□□□□ 0.94
SKP1P63208 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SKP1P63208 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SKP1P63208 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SKP1P63208 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.94■□□□□ 0.94
SKP1P63208 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SKP1P63208 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SKP1P63208 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SKP1P63208 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SKP1P63208 BX842568.3-201ENST00000418104 571 ntBASIC20.93■□□□□ 0.94
SKP1P63208 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms