Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC106739.1-201ENST00000617035 715 ntBASIC20.87■□□□□ 0.93
RAB38P57729 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB38P57729 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB38P57729 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB38P57729 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB38P57729 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB38P57729 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.86■□□□□ 0.93
RAB38P57729 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 MIR4767-201ENST00000582827 78 ntBASIC20.86■□□□□ 0.93
RAB38P57729 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB38P57729 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
RAB38P57729 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB38P57729 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RAB38P57729 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RAB38P57729 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB38P57729 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB38P57729 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB38P57729 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB38P57729 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB38P57729 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB38P57729 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RAB38P57729 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB38P57729 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB38P57729 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB38P57729 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
RAB38P57729 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB38P57729 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RAB38P57729 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB38P57729 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB38P57729 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RAB38P57729 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RAB38P57729 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB38P57729 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB38P57729 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RAB38P57729 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAB38P57729 OR2I1P-207ENST00000453522 948 ntBASIC20.83■□□□□ 0.93
RAB38P57729 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.83■□□□□ 0.93
RAB38P57729 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB38P57729 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB38P57729 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RAB38P57729 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAB38P57729 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB38P57729 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.83■□□□□ 0.92
RAB38P57729 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB38P57729 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.83■□□□□ 0.92
RAB38P57729 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB38P57729 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB38P57729 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB38P57729 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAB38P57729 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB38P57729 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB38P57729 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.82■□□□□ 0.92
RAB38P57729 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB38P57729 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.82■□□□□ 0.92
RAB38P57729 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB38P57729 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB38P57729 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB38P57729 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB38P57729 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB38P57729 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RAB38P57729 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB38P57729 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB38P57729 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB38P57729 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB38P57729 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB38P57729 EDA-201ENST00000338901 1233 ntBASIC20.8■□□□□ 0.92
RAB38P57729 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB38P57729 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB38P57729 AC133561.4-201ENST00000566112 224 ntBASIC20.8■□□□□ 0.92
RAB38P57729 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB38P57729 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RAB38P57729 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB38P57729 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB38P57729 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB38P57729 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB38P57729 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB38P57729 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB38P57729 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RAB38P57729 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB38P57729 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB38P57729 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAB38P57729 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB38P57729 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB38P57729 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAB38P57729 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.79■□□□□ 0.92
RAB38P57729 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAB38P57729 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB38P57729 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB38P57729 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB38P57729 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB38P57729 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB38P57729 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms