Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH4P55283 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH4P55283 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH4P55283 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH4P55283 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.72■■□□□ 1.23
CDH4P55283 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH4P55283 RASA4CP-201ENST00000424092 1398 ntBASIC22.72■■□□□ 1.23
CDH4P55283 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH4P55283 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.72■■□□□ 1.23
CDH4P55283 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH4P55283 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH4P55283 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH4P55283 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CDH4P55283 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDH4P55283 AC099791.1-201ENST00000416440 715 ntBASIC22.71■■□□□ 1.23
CDH4P55283 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.71■■□□□ 1.23
CDH4P55283 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.71■■□□□ 1.23
CDH4P55283 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
CDH4P55283 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH4P55283 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
CDH4P55283 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.71■■□□□ 1.23
CDH4P55283 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.7■■□□□ 1.22
CDH4P55283 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH4P55283 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.7■■□□□ 1.22
CDH4P55283 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CDH4P55283 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CDH4P55283 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
CDH4P55283 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDH4P55283 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH4P55283 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH4P55283 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CDH4P55283 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CDH4P55283 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH4P55283 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH4P55283 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH4P55283 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.69■■□□□ 1.22
CDH4P55283 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CDH4P55283 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.69■■□□□ 1.22
CDH4P55283 AC010525.1-201ENST00000585559 441 ntBASIC22.69■■□□□ 1.22
CDH4P55283 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH4P55283 CA15P2-201ENST00000611168 834 ntBASIC22.69■■□□□ 1.22
CDH4P55283 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDH4P55283 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.69■■□□□ 1.22
CDH4P55283 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH4P55283 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
CDH4P55283 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CDH4P55283 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CDH4P55283 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.68■■□□□ 1.22
CDH4P55283 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDH4P55283 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.68■■□□□ 1.22
CDH4P55283 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDH4P55283 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CDH4P55283 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.67■■□□□ 1.22
CDH4P55283 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.67■■□□□ 1.22
CDH4P55283 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CDH4P55283 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.67■■□□□ 1.22
CDH4P55283 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CDH4P55283 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CDH4P55283 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.66■■□□□ 1.22
CDH4P55283 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.66■■□□□ 1.22
CDH4P55283 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH4P55283 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.66■■□□□ 1.22
CDH4P55283 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH4P55283 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDH4P55283 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDH4P55283 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH4P55283 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH4P55283 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH4P55283 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH4P55283 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH4P55283 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH4P55283 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH4P55283 AC126544.1-201ENST00000580842 1059 ntBASIC22.65■■□□□ 1.22
CDH4P55283 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CDH4P55283 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CDH4P55283 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.64■■□□□ 1.22
CDH4P55283 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.64■■□□□ 1.22
CDH4P55283 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
CDH4P55283 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.64■■□□□ 1.21
CDH4P55283 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.64■■□□□ 1.21
CDH4P55283 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CDH4P55283 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.64■■□□□ 1.21
CDH4P55283 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CDH4P55283 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 DUSP8P5-201ENST00000422884 1815 ntBASIC22.64■■□□□ 1.21
CDH4P55283 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDH4P55283 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH4P55283 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms