Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRRX1P54821 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRRX1P54821 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRRX1P54821 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRRX1P54821 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
PRRX1P54821 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PRRX1P54821 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRRX1P54821 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.16■□□□□ 0.5
PRRX1P54821 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.16■□□□□ 0.5
PRRX1P54821 AL512631.2-201ENST00000604634 923 ntBASIC18.16■□□□□ 0.5
PRRX1P54821 AC009086.3-201ENST00000623486 1008 ntBASIC18.16■□□□□ 0.5
PRRX1P54821 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.16■□□□□ 0.5
PRRX1P54821 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRRX1P54821 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PRRX1P54821 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.15■□□□□ 0.5
PRRX1P54821 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
PRRX1P54821 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRRX1P54821 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.15■□□□□ 0.5
PRRX1P54821 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.15■□□□□ 0.5
PRRX1P54821 DUX4L19-201ENST00000557448 1267 ntBASIC18.15■□□□□ 0.5
PRRX1P54821 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.15■□□□□ 0.5
PRRX1P54821 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRRX1P54821 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRRX1P54821 AC008406.3-201ENST00000620001 1374 ntBASIC18.15■□□□□ 0.5
PRRX1P54821 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PRRX1P54821 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.15■□□□□ 0.5
PRRX1P54821 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.14■□□□□ 0.5
PRRX1P54821 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRRX1P54821 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRRX1P54821 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.14■□□□□ 0.49
PRRX1P54821 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 AC131281.2-201ENST00000520478 145 ntBASIC18.14■□□□□ 0.49
PRRX1P54821 AC099791.2-201ENST00000605725 427 ntBASIC18.14■□□□□ 0.49
PRRX1P54821 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.14■□□□□ 0.49
PRRX1P54821 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PRRX1P54821 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRRX1P54821 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
PRRX1P54821 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.14■□□□□ 0.49
PRRX1P54821 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.14■□□□□ 0.49
PRRX1P54821 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.13■□□□□ 0.49
PRRX1P54821 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.13■□□□□ 0.49
PRRX1P54821 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRRX1P54821 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.12■□□□□ 0.49
PRRX1P54821 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRRX1P54821 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRRX1P54821 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.12■□□□□ 0.49
PRRX1P54821 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PRRX1P54821 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.12■□□□□ 0.49
PRRX1P54821 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 AL136116.3-201ENST00000402907 1138 ntBASIC18.12■□□□□ 0.49
PRRX1P54821 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 MIR4466-201ENST00000606121 54 ntBASIC18.12■□□□□ 0.49
PRRX1P54821 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.12■□□□□ 0.49
PRRX1P54821 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRRX1P54821 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.12■□□□□ 0.49
PRRX1P54821 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRRX1P54821 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.12■□□□□ 0.49
PRRX1P54821 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRRX1P54821 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.11■□□□□ 0.49
PRRX1P54821 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRRX1P54821 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.11■□□□□ 0.49
PRRX1P54821 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.11■□□□□ 0.49
PRRX1P54821 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.11■□□□□ 0.49
PRRX1P54821 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.11■□□□□ 0.49
PRRX1P54821 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.11■□□□□ 0.49
PRRX1P54821 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRRX1P54821 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRRX1P54821 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRRX1P54821 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms