Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 NCOA5-202ENST00000372291 727 ntTSL 322.6■■□□□ 1.212e-6■■■■□ 22.4
NCBP2P52298 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.172e-6■■■■□ 22.4
NCBP2P52298 OSBPL9-214ENST00000489990 1012 ntTSL 58.55□□□□□ -1.045e-10■■■■□ 22.4
NCBP2P52298 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.285e-10■■■■□ 22.4
NCBP2P52298 OSBPL9-204ENST00000435274 2670 ntTSL 56.62□□□□□ -1.355e-10■■■■□ 22.4
NCBP2P52298 OSBPL9-215ENST00000495776 2831 ntTSL 26.32□□□□□ -1.45e-10■■■■□ 22.4
NCBP2P52298 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.32□□□□□ -1.45e-10■■■■□ 22.4
NCBP2P52298 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.445e-10■■■■□ 22.4
NCBP2P52298 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.93□□□□□ -1.465e-10■■■■□ 22.4
NCBP2P52298 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.86□□□□□ -0.351e-11■■■■□ 22.4
NCBP2P52298 FTX-207ENST00000602576 574 ntTSL 411.22□□□□□ -0.611e-11■■■■□ 22.4
NCBP2P52298 FTX-202ENST00000423992 696 ntTSL 510.18□□□□□ -0.781e-11■■■■□ 22.4
NCBP2P52298 FTX-209ENST00000602812 2356 ntTSL 1 (best)9.99□□□□□ -0.811e-11■■■■□ 22.4
NCBP2P52298 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.4□□□□□ -0.91e-11■■■■□ 22.4
NCBP2P52298 FTX-203ENST00000429124 2597 ntTSL 27.44□□□□□ -1.221e-11■■■■□ 22.4
NCBP2P52298 FTX-204ENST00000430772 708 ntTSL 57.1□□□□□ -1.271e-11■■■■□ 22.4
NCBP2P52298 FTX-206ENST00000602420 751 ntTSL 35.2□□□□□ -1.581e-11■■■■□ 22.4
NCBP2P52298 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.631e-11■■■■□ 22.4
NCBP2P52298 FTX-208ENST00000602776 561 ntTSL 43.97□□□□□ -1.771e-11■■■■□ 22.4
NCBP2P52298 ETF1-206ENST00000507939 713 ntTSL 518.78■□□□□ 0.63e-8■■■■□ 22.4
NCBP2P52298 ETF1-209ENST00000572514 990 ntTSL 516.1■□□□□ 0.173e-8■■■■□ 22.4
NCBP2P52298 ETF1-202ENST00000499810 3874 ntTSL 1 (best) BASIC11.77□□□□□ -0.533e-8■■■■□ 22.4
NCBP2P52298 ETF1-201ENST00000360541 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.693e-8■■■■□ 22.4
NCBP2P52298 ETF1-207ENST00000512198 745 ntTSL 57.06□□□□□ -1.283e-8■■■■□ 22.4
NCBP2P52298 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.47□□□□□ -0.094e-10■■■■□ 22.4
NCBP2P52298 SEC14L1-206ENST00000561633 603 ntTSL 1 (best)13.26□□□□□ -0.294e-10■■■■□ 22.4
NCBP2P52298 SEC14L1-207ENST00000561721 637 ntTSL 212.98□□□□□ -0.334e-10■■■■□ 22.4
NCBP2P52298 SNHG20-203ENST00000565256 1234 ntTSL 1 (best)12.48□□□□□ -0.414e-10■■■■□ 22.4
NCBP2P52298 SEC14L1-209ENST00000564509 806 ntTSL 1 (best)11.82□□□□□ -0.524e-10■■■■□ 22.4
NCBP2P52298 SEC14L1-224ENST00000589827 1791 ntTSL 211.4□□□□□ -0.584e-10■■■■□ 22.4
NCBP2P52298 SEC14L1-211ENST00000569632 377 ntTSL 1 (best)10.83□□□□□ -0.684e-10■■■■□ 22.4
NCBP2P52298 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.84e-10■■■■□ 22.4
NCBP2P52298 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.05■■□□□ 1.763e-6■■■■□ 22.4
NCBP2P52298 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.05■■□□□ 1.763e-6■■■■□ 22.4
NCBP2P52298 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.463e-6■■■■□ 22.4
NCBP2P52298 PCMTD1-205ENST00000521046 856 ntTSL 216.38■□□□□ 0.212e-11■■■■□ 22.3
NCBP2P52298 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.11■□□□□ 0.172e-11■■■■□ 22.3
NCBP2P52298 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.222e-11■■■■□ 22.3
NCBP2P52298 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.322e-11■■■■□ 22.3
NCBP2P52298 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.63□□□□□ -0.392e-11■■■■□ 22.3
NCBP2P52298 PCMTD1-203ENST00000519559 1204 ntTSL 25.74□□□□□ -1.492e-11■■■■□ 22.3
NCBP2P52298 CHD8-211ENST00000556833 416 ntTSL 513.31□□□□□ -0.281e-7■■■■□ 22.3
NCBP2P52298 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.11e-7■■■■□ 22.3
NCBP2P52298 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.06■□□□□ 0.85e-17■■■■□ 22.2
NCBP2P52298 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.65e-18■■■■□ 22.2
NCBP2P52298 FLVCR2-205ENST00000554496 441 ntTSL 311.19□□□□□ -0.625e-18■■■■□ 22.2
NCBP2P52298 FLVCR2-209ENST00000555385 218 ntTSL 48.84□□□□□ -0.995e-18■■■■□ 22.2
NCBP2P52298 RNA5SP387-201ENST00000364226 106 ntBASIC2.61□□□□□ -1.995e-18■■■■□ 22.2
NCBP2P52298 AC091060.1-201ENST00000623524 1766 ntBASIC23.09■■□□□ 1.293e-6■■■■□ 22.2
NCBP2P52298 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.073e-6■■■■□ 22.2
NCBP2P52298 WNK2-206ENST00000448039 2385 ntAPPRIS ALT2 TSL 1 (best)20.42■□□□□ 0.863e-6■■■■□ 22.2
NCBP2P52298 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.77■□□□□ 0.593e-6■■■■□ 22.2
NCBP2P52298 GABPB1-212ENST00000615671 6266 nt18.47■□□□□ 0.553e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.483e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.483e-6■■■■□ 22.2
NCBP2P52298 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.473e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.38■□□□□ 0.373e-6■■■■□ 22.2
NCBP2P52298 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.29■□□□□ 0.363e-6■■■■□ 22.2
NCBP2P52298 TCTE3-202ENST00000628156 2078 nt17.17■□□□□ 0.343e-6■■■■□ 22.2
NCBP2P52298 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.333e-6■■■■□ 22.2
NCBP2P52298 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.253e-6■■■■□ 22.2
NCBP2P52298 MTBP-208ENST00000523373 1219 ntTSL 516.41■□□□□ 0.223e-6■■■■□ 22.2
NCBP2P52298 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)15.76■□□□□ 0.113e-6■■■■□ 22.2
NCBP2P52298 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.58■□□□□ 0.083e-6■■■■□ 22.2
NCBP2P52298 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.58■□□□□ 0.083e-6■■■■□ 22.2
NCBP2P52298 RPS27-204ENST00000493224 573 ntTSL 215.53■□□□□ 0.083e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.16■□□□□ 0.023e-6■■■■□ 22.2
NCBP2P52298 AL133215.2-201ENST00000609242 977 ntBASIC14.93□□□□□ -0.023e-6■■■■□ 22.2
NCBP2P52298 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.023e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-206ENST00000589565 777 ntTSL 314.57□□□□□ -0.083e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-207ENST00000589952 488 ntTSL 414.54□□□□□ -0.083e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-204ENST00000587862 580 ntTSL 514.36□□□□□ -0.113e-6■■■■□ 22.2
NCBP2P52298 PRELID3A-205ENST00000588729 529 ntTSL 414.35□□□□□ -0.113e-6■■■■□ 22.2
NCBP2P52298 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.09□□□□□ -0.153e-6■■■■□ 22.2
NCBP2P52298 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.163e-6■■■■□ 22.2
NCBP2P52298 DEPDC7-204ENST00000532078 1118 ntTSL 213.74□□□□□ -0.213e-6■■■■□ 22.2
NCBP2P52298 SSX2IP-202ENST00000422026 759 ntTSL 313.57□□□□□ -0.243e-6■■■■□ 22.2
NCBP2P52298 ILF3-212ENST00000589173 570 ntTSL 513.14□□□□□ -0.313e-6■■■■□ 22.2
NCBP2P52298 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.323e-6■■■■□ 22.2
NCBP2P52298 ACSM3-203ENST00000501740 839 ntTSL 512.62□□□□□ -0.393e-6■■■■□ 22.2
NCBP2P52298 ILF3-204ENST00000585835 849 ntTSL 312.46□□□□□ -0.413e-6■■■■□ 22.2
NCBP2P52298 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.33□□□□□ -0.443e-6■■■■□ 22.2
NCBP2P52298 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.04□□□□□ -0.483e-6■■■■□ 22.2
NCBP2P52298 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.493e-6■■■■□ 22.2
NCBP2P52298 TOP2B-203ENST00000424225 3525 ntTSL 1 (best)11.93□□□□□ -0.53e-6■■■■□ 22.2
NCBP2P52298 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.53e-6■■■■□ 22.2
NCBP2P52298 MTBP-206ENST00000522308 1981 ntTSL 211.83□□□□□ -0.523e-6■■■■□ 22.2
NCBP2P52298 DEPDC7-203ENST00000427755 1212 ntTSL 211.79□□□□□ -0.523e-6■■■■□ 22.2
NCBP2P52298 GABPB1-208ENST00000558970 730 ntTSL 511.62□□□□□ -0.553e-6■■■■□ 22.2
NCBP2P52298 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.63e-6■■■■□ 22.2
NCBP2P52298 C18orf21-203ENST00000587719 581 ntTSL 411.29□□□□□ -0.63e-6■■■■□ 22.2
NCBP2P52298 C18orf21-206ENST00000593210 185 ntTSL 311.21□□□□□ -0.613e-6■■■■□ 22.2
NCBP2P52298 MTBP-202ENST00000456899 603 ntTSL 311.17□□□□□ -0.623e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-217ENST00000613466 1674 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.643e-6■■■■□ 22.2
NCBP2P52298 ACSM3-213ENST00000568235 558 ntTSL 410.95□□□□□ -0.663e-6■■■■□ 22.2
NCBP2P52298 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC10.74□□□□□ -0.693e-6■■■■□ 22.2
NCBP2P52298 RPS27-203ENST00000477151 467 ntTSL 210.43□□□□□ -0.743e-6■■■■□ 22.2
NCBP2P52298 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC10.38□□□□□ -0.753e-6■■■■□ 22.2
NCBP2P52298 C18orf21-201ENST00000269194 703 ntTSL 210.21□□□□□ -0.773e-6■■■■□ 22.2
NCBP2P52298 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC10.16□□□□□ -0.783e-6■■■■□ 22.2
Retrieved 100 of 18,329 protein–RNA pairs in 572.2 ms