Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CPS1P31327 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.81■■■□□ 2.68
CPS1P31327 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.81■■■□□ 2.68
CPS1P31327 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.81■■■□□ 2.68
CPS1P31327 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 AL138781.1-201ENST00000566567 1274 ntBASIC31.8■■■□□ 2.68
CPS1P31327 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.8■■■□□ 2.68
CPS1P31327 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CPS1P31327 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.8■■■□□ 2.68
CPS1P31327 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.8■■■□□ 2.68
CPS1P31327 ITM2C-210ENST00000620962 501 ntBASIC31.8■■■□□ 2.68
CPS1P31327 AC087239.1-201ENST00000622671 572 ntBASIC31.8■■■□□ 2.68
CPS1P31327 AC145676.1-201ENST00000514988 2004 ntBASIC31.8■■■□□ 2.68
CPS1P31327 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CPS1P31327 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CPS1P31327 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
CPS1P31327 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CPS1P31327 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CPS1P31327 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.79■■■□□ 2.68
CPS1P31327 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC31.79■■■□□ 2.68
CPS1P31327 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.79■■■□□ 2.68
CPS1P31327 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CPS1P31327 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.78■■■□□ 2.68
CPS1P31327 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.78■■■□□ 2.68
CPS1P31327 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CPS1P31327 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CPS1P31327 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CPS1P31327 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CPS1P31327 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CPS1P31327 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
CPS1P31327 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.77■■■□□ 2.68
CPS1P31327 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.77■■■□□ 2.68
CPS1P31327 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.77■■■□□ 2.68
CPS1P31327 MFSD11-216ENST00000590393 1141 ntBASIC31.77■■■□□ 2.68
CPS1P31327 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.77■■■□□ 2.68
CPS1P31327 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CPS1P31327 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.77■■■□□ 2.68
CPS1P31327 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CPS1P31327 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.68
CPS1P31327 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.76■■■□□ 2.68
CPS1P31327 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CPS1P31327 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CPS1P31327 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CPS1P31327 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CPS1P31327 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CPS1P31327 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CPS1P31327 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.75■■■□□ 2.67
CPS1P31327 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.75■■■□□ 2.67
CPS1P31327 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CPS1P31327 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.75■■■□□ 2.67
CPS1P31327 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CPS1P31327 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.74■■■□□ 2.67
CPS1P31327 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CPS1P31327 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
CPS1P31327 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CPS1P31327 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.74■■■□□ 2.67
CPS1P31327 AC083906.2-201ENST00000511578 360 ntBASIC31.74■■■□□ 2.67
CPS1P31327 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.74■■■□□ 2.67
CPS1P31327 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.74■■■□□ 2.67
CPS1P31327 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CPS1P31327 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
CPS1P31327 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
CPS1P31327 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.73■■■□□ 2.67
CPS1P31327 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CPS1P31327 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CPS1P31327 POU5F1P3-201ENST00000428824 1078 ntBASIC31.73■■■□□ 2.67
CPS1P31327 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CPS1P31327 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.73■■■□□ 2.67
CPS1P31327 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CPS1P31327 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CPS1P31327 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CPS1P31327 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
CPS1P31327 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.72■■■□□ 2.67
CPS1P31327 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.72■■■□□ 2.67
CPS1P31327 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CPS1P31327 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CPS1P31327 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
CPS1P31327 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CPS1P31327 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CPS1P31327 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CPS1P31327 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CPS1P31327 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.7■■■□□ 2.67
CPS1P31327 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.7■■■□□ 2.67
CPS1P31327 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms