Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC026271.2-201ENST00000428091 497 ntBASIC18.73■□□□□ 0.59
COL8A2P25067 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL8A2P25067 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL8A2P25067 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL8A2P25067 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL8A2P25067 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL8A2P25067 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL8A2P25067 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL8A2P25067 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.72■□□□□ 0.59
COL8A2P25067 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.72■□□□□ 0.59
COL8A2P25067 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.72■□□□□ 0.59
COL8A2P25067 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL8A2P25067 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL8A2P25067 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL8A2P25067 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.72■□□□□ 0.59
COL8A2P25067 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL8A2P25067 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
COL8A2P25067 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL8A2P25067 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL8A2P25067 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL8A2P25067 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL8A2P25067 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.71■□□□□ 0.59
COL8A2P25067 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.71■□□□□ 0.59
COL8A2P25067 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL8A2P25067 TSPY26P-201ENST00000476365 1326 ntBASIC18.71■□□□□ 0.59
COL8A2P25067 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.7■□□□□ 0.58
COL8A2P25067 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
COL8A2P25067 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.7■□□□□ 0.58
COL8A2P25067 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.7■□□□□ 0.58
COL8A2P25067 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL8A2P25067 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COL8A2P25067 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 AL353803.4-201ENST00000565882 1934 ntBASIC18.69■□□□□ 0.58
COL8A2P25067 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
COL8A2P25067 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.69■□□□□ 0.58
COL8A2P25067 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL8A2P25067 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL8A2P25067 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.68■□□□□ 0.58
COL8A2P25067 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL8A2P25067 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.68■□□□□ 0.58
COL8A2P25067 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.68■□□□□ 0.58
COL8A2P25067 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL8A2P25067 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL8A2P25067 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.68■□□□□ 0.58
COL8A2P25067 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL8A2P25067 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
COL8A2P25067 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
COL8A2P25067 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL8A2P25067 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL8A2P25067 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL8A2P25067 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL8A2P25067 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.67■□□□□ 0.58
COL8A2P25067 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL8A2P25067 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL8A2P25067 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL8A2P25067 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL8A2P25067 OR2I1P-207ENST00000453522 948 ntBASIC18.67■□□□□ 0.58
COL8A2P25067 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.67■□□□□ 0.58
COL8A2P25067 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.67■□□□□ 0.58
COL8A2P25067 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL8A2P25067 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COL8A2P25067 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
COL8A2P25067 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL8A2P25067 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL8A2P25067 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL8A2P25067 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.65■□□□□ 0.58
COL8A2P25067 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL8A2P25067 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL8A2P25067 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
COL8A2P25067 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms