Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.2■■□□□ 1.14
TIMP2P16035 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TIMP2P16035 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.2■■□□□ 1.14
TIMP2P16035 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.19■■□□□ 1.14
TIMP2P16035 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TIMP2P16035 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TIMP2P16035 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TIMP2P16035 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.19■■□□□ 1.14
TIMP2P16035 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TIMP2P16035 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.18■■□□□ 1.14
TIMP2P16035 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TIMP2P16035 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
TIMP2P16035 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TIMP2P16035 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.18■■□□□ 1.14
TIMP2P16035 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
TIMP2P16035 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.17■■□□□ 1.14
TIMP2P16035 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TIMP2P16035 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TIMP2P16035 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TIMP2P16035 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TIMP2P16035 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TIMP2P16035 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TIMP2P16035 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.17■■□□□ 1.14
TIMP2P16035 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.17■■□□□ 1.14
TIMP2P16035 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.17■■□□□ 1.14
TIMP2P16035 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TIMP2P16035 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.16■■□□□ 1.14
TIMP2P16035 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TIMP2P16035 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
TIMP2P16035 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.16■■□□□ 1.14
TIMP2P16035 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.16■■□□□ 1.14
TIMP2P16035 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TIMP2P16035 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP2P16035 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TIMP2P16035 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.16■■□□□ 1.14
TIMP2P16035 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TIMP2P16035 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TIMP2P16035 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.15■■□□□ 1.14
TIMP2P16035 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.15■■□□□ 1.14
TIMP2P16035 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.15■■□□□ 1.14
TIMP2P16035 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.15■■□□□ 1.14
TIMP2P16035 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TIMP2P16035 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TIMP2P16035 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP2P16035 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
TIMP2P16035 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TIMP2P16035 TSPY26P-201ENST00000476365 1326 ntBASIC22.14■■□□□ 1.14
TIMP2P16035 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
TIMP2P16035 IRS3P-201ENST00000223076 1006 ntBASIC22.14■■□□□ 1.13
TIMP2P16035 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
TIMP2P16035 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TIMP2P16035 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TIMP2P16035 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.14■■□□□ 1.13
TIMP2P16035 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.14■■□□□ 1.13
TIMP2P16035 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TIMP2P16035 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.14■■□□□ 1.13
TIMP2P16035 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
TIMP2P16035 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP2P16035 AP005435.1-201ENST00000529293 1178 ntBASIC22.13■■□□□ 1.13
TIMP2P16035 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.13■■□□□ 1.13
TIMP2P16035 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.13■■□□□ 1.13
TIMP2P16035 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.13■■□□□ 1.13
TIMP2P16035 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TIMP2P16035 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP2P16035 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP2P16035 DUSP8P3-201ENST00000399571 1760 ntBASIC22.12■■□□□ 1.13
TIMP2P16035 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP2P16035 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP2P16035 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.12■■□□□ 1.13
TIMP2P16035 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.12■■□□□ 1.13
TIMP2P16035 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP2P16035 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP2P16035 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.12■■□□□ 1.13
TIMP2P16035 IGHV3-19-201ENST00000521488 291 ntBASIC22.12■■□□□ 1.13
TIMP2P16035 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.12■■□□□ 1.13
TIMP2P16035 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.12■■□□□ 1.13
TIMP2P16035 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
TIMP2P16035 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP2P16035 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP2P16035 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.11■■□□□ 1.13
TIMP2P16035 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP2P16035 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms