Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 AC021231.2-201ENST00000594613 730 ntBASIC20.28■□□□□ 0.84
SMIM18P0DKX4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.28■□□□□ 0.84
SMIM18P0DKX4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 HLA-V-202ENST00000446817 847 ntBASIC20.27■□□□□ 0.84
SMIM18P0DKX4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM18P0DKX4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM18P0DKX4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM18P0DKX4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.26■□□□□ 0.83
SMIM18P0DKX4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 FEM1AP4-201ENST00000443167 1987 ntBASIC20.25■□□□□ 0.83
SMIM18P0DKX4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM18P0DKX4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM18P0DKX4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SMIM18P0DKX4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.23■□□□□ 0.83
SMIM18P0DKX4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM18P0DKX4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.23■□□□□ 0.83
SMIM18P0DKX4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMIM18P0DKX4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM18P0DKX4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms