Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MRPL3P09001 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.82■□□□□ 0.76
MRPL3P09001 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MRPL3P09001 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MRPL3P09001 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 AC080038.3-201ENST00000623346 1952 ntBASIC19.82■□□□□ 0.76
MRPL3P09001 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
MRPL3P09001 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL3P09001 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MRPL3P09001 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPL3P09001 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
MRPL3P09001 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MRPL3P09001 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.81■□□□□ 0.76
MRPL3P09001 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MRPL3P09001 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MRPL3P09001 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 TSPY13P-201ENST00000338964 914 ntBASIC19.81■□□□□ 0.76
MRPL3P09001 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MRPL3P09001 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPL3P09001 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL3P09001 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL3P09001 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.8■□□□□ 0.76
MRPL3P09001 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL3P09001 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MRPL3P09001 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MRPL3P09001 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL3P09001 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MRPL3P09001 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL3P09001 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL3P09001 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.79■□□□□ 0.76
MRPL3P09001 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL3P09001 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL3P09001 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.79■□□□□ 0.76
MRPL3P09001 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL3P09001 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL3P09001 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL3P09001 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
MRPL3P09001 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL3P09001 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MRPL3P09001 AC092053.2-201ENST00000640557 1818 ntBASIC19.79■□□□□ 0.76
MRPL3P09001 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MRPL3P09001 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.78■□□□□ 0.76
MRPL3P09001 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.78■□□□□ 0.76
MRPL3P09001 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL3P09001 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL3P09001 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
MRPL3P09001 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.77■□□□□ 0.76
MRPL3P09001 AC144652.1-201ENST00000609974 1624 ntBASIC19.77■□□□□ 0.76
MRPL3P09001 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
MRPL3P09001 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL3P09001 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL3P09001 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.77■□□□□ 0.76
MRPL3P09001 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.77■□□□□ 0.76
MRPL3P09001 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MRPL3P09001 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.77■□□□□ 0.76
MRPL3P09001 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL3P09001 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MRPL3P09001 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MRPL3P09001 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MRPL3P09001 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.76■□□□□ 0.75
MRPL3P09001 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
MRPL3P09001 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 SNX5-217ENST00000606557 1087 ntBASIC19.76■□□□□ 0.75
MRPL3P09001 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms