Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CPNE6O95741 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE6O95741 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE6O95741 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE6O95741 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE6O95741 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE6O95741 AC104564.3-201ENST00000582367 638 ntBASIC21.7■■□□□ 1.06
CPNE6O95741 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CPNE6O95741 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE6O95741 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CPNE6O95741 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE6O95741 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE6O95741 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.7■■□□□ 1.06
CPNE6O95741 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE6O95741 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE6O95741 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CPNE6O95741 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE6O95741 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE6O95741 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE6O95741 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE6O95741 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE6O95741 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE6O95741 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE6O95741 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CPNE6O95741 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE6O95741 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE6O95741 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.68■■□□□ 1.06
CPNE6O95741 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE6O95741 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE6O95741 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.68■■□□□ 1.06
CPNE6O95741 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.68■■□□□ 1.06
CPNE6O95741 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE6O95741 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE6O95741 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CPNE6O95741 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE6O95741 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE6O95741 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE6O95741 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE6O95741 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CPNE6O95741 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.67■■□□□ 1.06
CPNE6O95741 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE6O95741 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CPNE6O95741 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.66■■□□□ 1.06
CPNE6O95741 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE6O95741 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CPNE6O95741 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE6O95741 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CPNE6O95741 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE6O95741 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE6O95741 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE6O95741 AL117328.2-201ENST00000624617 1940 ntBASIC21.65■■□□□ 1.06
CPNE6O95741 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.65■■□□□ 1.06
CPNE6O95741 AC126544.1-201ENST00000580842 1059 ntBASIC21.65■■□□□ 1.06
CPNE6O95741 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE6O95741 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.65■■□□□ 1.06
CPNE6O95741 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE6O95741 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CPNE6O95741 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.65■■□□□ 1.06
CPNE6O95741 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.06
CPNE6O95741 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
CPNE6O95741 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.64■■□□□ 1.06
CPNE6O95741 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CPNE6O95741 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.64■■□□□ 1.06
CPNE6O95741 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE6O95741 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.64■■□□□ 1.05
CPNE6O95741 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.64■■□□□ 1.05
CPNE6O95741 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE6O95741 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE6O95741 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE6O95741 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CPNE6O95741 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.64■■□□□ 1.05
CPNE6O95741 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE6O95741 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE6O95741 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE6O95741 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE6O95741 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE6O95741 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE6O95741 AC087623.3-201ENST00000607047 1098 ntBASIC21.63■■□□□ 1.05
CPNE6O95741 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CPNE6O95741 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE6O95741 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE6O95741 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE6O95741 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE6O95741 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE6O95741 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE6O95741 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE6O95741 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE6O95741 C9orf163-202ENST00000624034 2573 ntBASIC21.62■■□□□ 1.05
CPNE6O95741 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE6O95741 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE6O95741 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CPNE6O95741 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms