Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.53■□□□□ 0.56
SIX6O95475 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.53■□□□□ 0.56
SIX6O95475 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SIX6O95475 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SIX6O95475 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SIX6O95475 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SIX6O95475 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SIX6O95475 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX6O95475 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SIX6O95475 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX6O95475 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX6O95475 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SIX6O95475 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX6O95475 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.52■□□□□ 0.56
SIX6O95475 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX6O95475 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIX6O95475 AL157400.5-201ENST00000507624 621 ntBASIC18.52■□□□□ 0.56
SIX6O95475 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SIX6O95475 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SIX6O95475 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIX6O95475 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIX6O95475 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIX6O95475 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SIX6O95475 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 AC010542.4-201ENST00000563151 1910 ntBASIC18.51■□□□□ 0.55
SIX6O95475 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 AL157384.1-201ENST00000445995 2473 ntBASIC18.51■□□□□ 0.55
SIX6O95475 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIX6O95475 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIX6O95475 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.5■□□□□ 0.55
SIX6O95475 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIX6O95475 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX6O95475 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.5■□□□□ 0.55
SIX6O95475 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SIX6O95475 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 DUX4L11-201ENST00000611504 1267 ntBASIC18.49■□□□□ 0.55
SIX6O95475 DUX4L12-201ENST00000614593 1267 ntBASIC18.49■□□□□ 0.55
SIX6O95475 DUX4L14-201ENST00000621227 1267 ntBASIC18.49■□□□□ 0.55
SIX6O95475 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.49■□□□□ 0.55
SIX6O95475 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SIX6O95475 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX6O95475 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.49■□□□□ 0.55
SIX6O95475 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIX6O95475 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SIX6O95475 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.48■□□□□ 0.55
SIX6O95475 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SIX6O95475 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.48■□□□□ 0.55
SIX6O95475 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIX6O95475 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX6O95475 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX6O95475 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.47■□□□□ 0.55
SIX6O95475 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.47■□□□□ 0.55
SIX6O95475 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.47■□□□□ 0.55
SIX6O95475 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SIX6O95475 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SIX6O95475 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIX6O95475 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX6O95475 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX6O95475 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX6O95475 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIX6O95475 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.46■□□□□ 0.55
SIX6O95475 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SIX6O95475 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIX6O95475 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.46■□□□□ 0.55
SIX6O95475 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.46■□□□□ 0.55
SIX6O95475 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SIX6O95475 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms