Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.02■■□□□ 1.12
H3BM21 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.02■■□□□ 1.12
H3BM21 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
H3BM21 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
H3BM21 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
H3BM21 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
H3BM21 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
H3BM21 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.01■■□□□ 1.11
H3BM21 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.01■■□□□ 1.11
H3BM21 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.01■■□□□ 1.11
H3BM21 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
H3BM21 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
H3BM21 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.01■■□□□ 1.11
H3BM21 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.01■■□□□ 1.11
H3BM21 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.01■■□□□ 1.11
H3BM21 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.01■■□□□ 1.11
H3BM21 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.01■■□□□ 1.11
H3BM21 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.01■■□□□ 1.11
H3BM21 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
H3BM21 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
H3BM21 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
H3BM21 H19-210ENST00000439725 1929 ntTSL 2 BASIC22■■□□□ 1.11
H3BM21 AK1-201ENST00000223836 736 ntTSL 3 BASIC22■■□□□ 1.11
H3BM21 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22■■□□□ 1.11
H3BM21 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22■■□□□ 1.11
H3BM21 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
H3BM21 ANOS2P-203ENST00000472227 1816 ntBASIC22■■□□□ 1.11
H3BM21 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.99■■□□□ 1.11
H3BM21 SLC47A1P1-202ENST00000449666 945 ntBASIC21.99■■□□□ 1.11
H3BM21 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
H3BM21 AC133637.1-201ENST00000624115 1537 ntBASIC21.99■■□□□ 1.11
H3BM21 FP325331.1-202ENST00000623531 1380 ntBASIC21.99■■□□□ 1.11
H3BM21 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3BM21 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.98■■□□□ 1.11
H3BM21 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3BM21 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3BM21 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
H3BM21 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.98■■□□□ 1.11
H3BM21 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.98■■□□□ 1.11
H3BM21 AC087623.3-201ENST00000607047 1098 ntBASIC21.98■■□□□ 1.11
H3BM21 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3BM21 AC079630.1-202ENST00000618127 1840 ntBASIC21.98■■□□□ 1.11
H3BM21 TSPY26P-201ENST00000476365 1326 ntBASIC21.98■■□□□ 1.11
H3BM21 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3BM21 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
H3BM21 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H3BM21 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.97■■□□□ 1.11
H3BM21 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
H3BM21 AC144652.1-201ENST00000609974 1624 ntBASIC21.97■■□□□ 1.11
H3BM21 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H3BM21 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
H3BM21 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
H3BM21 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
H3BM21 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
H3BM21 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
H3BM21 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
H3BM21 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.96■■□□□ 1.11
H3BM21 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.96■■□□□ 1.11
H3BM21 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.96■■□□□ 1.11
H3BM21 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
H3BM21 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.95■■□□□ 1.1
H3BM21 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.95■■□□□ 1.1
H3BM21 AC092068.2-201ENST00000590491 1708 ntBASIC21.95■■□□□ 1.1
H3BM21 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
H3BM21 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
H3BM21 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.95■■□□□ 1.1
H3BM21 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H3BM21 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.95■■□□□ 1.1
H3BM21 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.95■■□□□ 1.1
H3BM21 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H3BM21 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
H3BM21 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.95■■□□□ 1.1
H3BM21 AL499627.2-201ENST00000606283 725 ntBASIC21.95■■□□□ 1.1
H3BM21 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H3BM21 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
H3BM21 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
H3BM21 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.94■■□□□ 1.1
H3BM21 IGHV3-19-201ENST00000521488 291 ntBASIC21.94■■□□□ 1.1
H3BM21 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.94■■□□□ 1.1
H3BM21 DUX4L4-201ENST00000566884 1269 ntBASIC21.94■■□□□ 1.1
H3BM21 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.94■■□□□ 1.1
H3BM21 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.94■■□□□ 1.1
H3BM21 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
H3BM21 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.94■■□□□ 1.1
H3BM21 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms