Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRDV1A0A1B0GX56 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRDV1A0A1B0GX56 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRDV1A0A1B0GX56 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRDV1A0A1B0GX56 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRDV1A0A1B0GX56 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRDV1A0A1B0GX56 AC005229.4-201ENST00000610085 2198 ntBASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 AC073130.3-201ENST00000624389 2278 ntBASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRDV1A0A1B0GX56 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 LONRF2P2-201ENST00000439212 571 ntBASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 SPCS2P3-201ENST00000500401 656 ntBASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRDV1A0A1B0GX56 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.42■□□□□ 0.7
TRDV1A0A1B0GX56 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRDV1A0A1B0GX56 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
TRDV1A0A1B0GX56 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms