Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV11-1A0A0K0K1C0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRBV11-1A0A0K0K1C0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MIR935-201ENST00000401179 91 ntBASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV11-1A0A0K0K1C0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV11-1A0A0K0K1C0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV11-1A0A0K0K1C0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms