Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 DUX4L4-201ENST00000566884 1269 ntBASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AC092028.1-203ENST00000608262 953 ntBASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV10-1A0A0K0K1A3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 MTDHP2-201ENST00000601468 714 ntBASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 AC092053.2-201ENST00000640557 1818 ntBASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV10-1A0A0K0K1A3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
TRBV10-1A0A0K0K1A3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC137767.1-201ENST00000602918 1920 ntBASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRBV10-1A0A0K0K1A3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV10-1A0A0K0K1A3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms