Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TRAV22A0A0B4J277 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV22A0A0B4J277 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 COMT-203ENST00000403184 2217 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 CHML-205ENST00000638160 705 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV22A0A0B4J277 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV22A0A0B4J277 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 AL158211.5-201ENST00000623583 2518 ntBASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV22A0A0B4J277 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms