Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC127496.7-201ENST00000625110 1798 ntBASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 LINC00526-201ENST00000581067 1875 ntBASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC010997.5-201ENST00000609182 354 ntBASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-8A0A0A6YYG3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC009299.2-201ENST00000482477 511 ntBASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 DUX4L4-201ENST00000566884 1269 ntBASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC009086.3-201ENST00000623486 1008 ntBASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TSPY9P-201ENST00000440215 945 ntBASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TSPY11P-201ENST00000442607 1045 ntBASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-8A0A0A6YYG3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC009102.2-201ENST00000606772 1639 ntBASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms