Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 DUX4L19-201ENST00000557448 1267 ntBASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC024257.2-201ENST00000549699 147 ntBASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 pRNA.6-201ENST00000610482 90 ntBASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 pRNA.5-201ENST00000612139 90 ntBASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 pRNA.11-201ENST00000618423 90 ntBASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 pRNA.13-201ENST00000619112 90 ntBASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AL031432.3-201ENST00000607698 485 ntBASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SYT6-210ENST00000641643 1587 ntBASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 MIR3181-201ENST00000578512 73 ntBASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 MIR935-201ENST00000401179 91 ntBASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF12-TNFSF13A0A0A6YY99 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 C9orf163-202ENST00000624034 2573 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms