Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NCDNQ9UBB6 AL022313.4-201ENST00000562756 2046 ntBASIC13.29□□□□□ -0.28
NCDNQ9UBB6 NRADDP-202ENST00000641269 1585 ntBASIC13.28□□□□□ -0.28
NCDNQ9UBB6 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 PRDX3P2-201ENST00000447051 611 ntBASIC13.28□□□□□ -0.28
NCDNQ9UBB6 MIR4526-201ENST00000583168 87 ntBASIC13.28□□□□□ -0.28
NCDNQ9UBB6 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 AC012617.1-204ENST00000586340 2305 ntBASIC13.28□□□□□ -0.28
NCDNQ9UBB6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.28□□□□□ -0.28
NCDNQ9UBB6 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 AC002350.2-201ENST00000623894 1828 ntBASIC13.27□□□□□ -0.28
NCDNQ9UBB6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 AC089987.1-201ENST00000551654 2209 ntBASIC13.27□□□□□ -0.28
NCDNQ9UBB6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NCDNQ9UBB6 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SNORA30.1-201ENST00000363193 129 ntBASIC13.27□□□□□ -0.29
NCDNQ9UBB6 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 ALMS1P1-201ENST00000428767 921 ntBASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC105424.1-201ENST00000514583 209 ntBASIC13.27□□□□□ -0.29
NCDNQ9UBB6 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 AC099552.4-201ENST00000624248 949 ntBASIC13.27□□□□□ -0.29
NCDNQ9UBB6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NCDNQ9UBB6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.26□□□□□ -0.29
NCDNQ9UBB6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms