Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 BAK1P1-201ENST00000317045 636 ntBASIC14.24□□□□□ -0.13
LMO3Q8TAP4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 RPL13AP19-201ENST00000434320 584 ntBASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 RN7SL128P-201ENST00000467883 305 ntBASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SRPK2P-201ENST00000523408 1100 ntBASIC14.24□□□□□ -0.13
LMO3Q8TAP4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC113385.2-201ENST00000614465 762 ntBASIC14.24□□□□□ -0.13
LMO3Q8TAP4 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO3Q8TAP4 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AC104961.1-201ENST00000427605 771 ntBASIC14.23□□□□□ -0.13
LMO3Q8TAP4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 RPL35P1-201ENST00000450819 370 ntBASIC14.23□□□□□ -0.13
LMO3Q8TAP4 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 SNORA47-201ENST00000458862 138 ntBASIC14.23□□□□□ -0.13
LMO3Q8TAP4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AC084752.1-201ENST00000509766 622 ntBASIC14.23□□□□□ -0.13
LMO3Q8TAP4 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AC090136.2-201ENST00000517809 420 ntBASIC14.23□□□□□ -0.13
LMO3Q8TAP4 IGHV3-37-201ENST00000518544 340 ntBASIC14.23□□□□□ -0.13
LMO3Q8TAP4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO3Q8TAP4 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms