Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 APTX-206ENST00000379825 2023 ntTSL 2 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC010970.1-201ENST00000445125 1848 ntBASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC106782.3-201ENST00000563429 258 ntBASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC18.52■□□□□ 0.55
SPHKAPQ2M3C7 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 MIR4640-201ENST00000581824 90 ntBASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 MIR1914-201ENST00000607800 80 ntBASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 AC112236.2-201ENST00000608402 845 ntBASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 HIST1H2APS4-202ENST00000635537 681 ntBASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPHKAPQ2M3C7 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 AGGF1P10-201ENST00000635005 2191 ntBASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 HNRNPA1P7-201ENST00000521273 963 ntBASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 AP006248.1-201ENST00000610471 67 ntBASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 APP-205ENST00000358918 2366 ntTSL 5 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPHKAPQ2M3C7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms