Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.98□□□□□ -0.17
MMP13P45452 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 AC100858.1-201ENST00000514059 1228 ntBASIC13.98□□□□□ -0.17
MMP13P45452 RNA5SP423-201ENST00000517127 109 ntBASIC13.98□□□□□ -0.17
MMP13P45452 AC079328.1-201ENST00000560358 952 ntBASIC13.98□□□□□ -0.17
MMP13P45452 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.98□□□□□ -0.17
MMP13P45452 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.98□□□□□ -0.17
MMP13P45452 AC007952.4-201ENST00000573866 637 ntBASIC13.98□□□□□ -0.17
MMP13P45452 NUDT4P2-201ENST00000578341 546 ntBASIC13.98□□□□□ -0.17
MMP13P45452 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.98□□□□□ -0.17
MMP13P45452 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.98□□□□□ -0.17
MMP13P45452 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.98□□□□□ -0.17
MMP13P45452 AC140113.1-201ENST00000603467 169 ntBASIC13.98□□□□□ -0.17
MMP13P45452 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.98□□□□□ -0.17
MMP13P45452 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.98□□□□□ -0.17
MMP13P45452 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
MMP13P45452 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.98□□□□□ -0.17
MMP13P45452 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
MMP13P45452 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
MMP13P45452 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MMP13P45452 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MMP13P45452 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 KCTD21-AS1-207ENST00000600795 1549 ntBASIC13.97□□□□□ -0.17
MMP13P45452 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 AL132642.2-201ENST00000623423 1998 ntBASIC13.97□□□□□ -0.17
MMP13P45452 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 Z69890.1-201ENST00000382990 339 ntBASIC13.97□□□□□ -0.17
MMP13P45452 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.97□□□□□ -0.17
MMP13P45452 HIST2H2BA-201ENST00000412169 381 ntBASIC13.97□□□□□ -0.17
MMP13P45452 AC073210.1-201ENST00000414799 232 ntBASIC13.97□□□□□ -0.17
MMP13P45452 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.97□□□□□ -0.17
MMP13P45452 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.97□□□□□ -0.17
MMP13P45452 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.97□□□□□ -0.17
MMP13P45452 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.97□□□□□ -0.17
MMP13P45452 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.97□□□□□ -0.17
MMP13P45452 RNA5SP406-201ENST00000516106 112 ntBASIC13.97□□□□□ -0.17
MMP13P45452 IGHV1-12-201ENST00000518307 205 ntBASIC13.97□□□□□ -0.17
MMP13P45452 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.97□□□□□ -0.17
MMP13P45452 AP002803.1-201ENST00000528836 498 ntBASIC13.97□□□□□ -0.17
MMP13P45452 AP000911.2-201ENST00000534330 502 ntBASIC13.97□□□□□ -0.17
MMP13P45452 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
MMP13P45452 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 AC016629.1-201ENST00000596579 586 ntBASIC13.97□□□□□ -0.17
MMP13P45452 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.97□□□□□ -0.17
MMP13P45452 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.97□□□□□ -0.17
MMP13P45452 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 AC005618.3-201ENST00000624928 458 ntBASIC13.97□□□□□ -0.17
MMP13P45452 AC128714.1-201ENST00000637035 887 ntBASIC13.97□□□□□ -0.17
MMP13P45452 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MMP13P45452 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC13.97□□□□□ -0.17
MMP13P45452 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
MMP13P45452 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms