Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 AC007952.5-201ENST00000572818 1486 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 AC092902.5-201ENST00000641650 3256 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 AC018735.1-201ENST00000437208 1502 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN1P35523 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLCN1P35523 AC092580.1-201ENST00000433998 658 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN1P35523 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.34■□□□□ 0.05
CLCN1P35523 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN1P35523 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.34■□□□□ 0.05
CLCN1P35523 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN1P35523 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN1P35523 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 AL023803.2-201ENST00000620080 638 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 AL591471.1-201ENST00000621855 229 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 AHCYP4-201ENST00000419201 1315 ntBASIC15.34■□□□□ 0.05
CLCN1P35523 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLCN1P35523 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCN1P35523 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN1P35523 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN1P35523 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
CLCN1P35523 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CLCN1P35523 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 C2-211ENST00000469372 1906 ntTSL 2 BASIC15.33■□□□□ 0.05
CLCN1P35523 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.33■□□□□ 0.05
CLCN1P35523 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC15.33■□□□□ 0.05
CLCN1P35523 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN1P35523 AP002353.1-201ENST00000528257 1599 ntBASIC15.33■□□□□ 0.05
CLCN1P35523 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 FMO6P-201ENST00000236166 1620 ntBASIC15.33■□□□□ 0.04
CLCN1P35523 AC008158.1-201ENST00000578759 3668 ntBASIC15.33■□□□□ 0.04
CLCN1P35523 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CLCN1P35523 NBN-203ENST00000409330 4523 ntTSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN1P35523 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN1P35523 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.33■□□□□ 0.04
CLCN1P35523 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN1P35523 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN1P35523 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN1P35523 AL512310.5-201ENST00000551999 515 ntBASIC15.33■□□□□ 0.04
CLCN1P35523 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.33■□□□□ 0.04
CLCN1P35523 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms