Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.11■□□□□ 0.01
TPM3P06753 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC15.11■□□□□ 0.01
TPM3P06753 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 CICP19-201ENST00000632944 2357 ntBASIC15.11■□□□□ 0.01
TPM3P06753 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC15.11■□□□□ 0.01
TPM3P06753 POM121L1P-202ENST00000605258 1835 ntBASIC15.11■□□□□ 0.01
TPM3P06753 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 AL357054.4-201ENST00000606285 2814 ntBASIC15.11■□□□□ 0.01
TPM3P06753 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TPM3P06753 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.11■□□□□ 0.01
TPM3P06753 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.11■□□□□ 0.01
TPM3P06753 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 AC234783.1-201ENST00000441761 496 ntBASIC15.11■□□□□ 0.01
TPM3P06753 HSPB1P2-201ENST00000448722 546 ntBASIC15.11■□□□□ 0.01
TPM3P06753 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.11■□□□□ 0.01
TPM3P06753 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC15.11■□□□□ 0.01
TPM3P06753 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.11■□□□□ 0.01
TPM3P06753 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.11■□□□□ 0.01
TPM3P06753 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 RN7SL163P-201ENST00000583100 276 ntBASIC15.11■□□□□ 0.01
TPM3P06753 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 DBIL5P-203ENST00000536214 2677 ntBASIC15.11■□□□□ 0.01
TPM3P06753 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TPM3P06753 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC15.11■□□□□ 0.01
TPM3P06753 CSPG4P13-202ENST00000567704 4801 ntBASIC15.1■□□□□ 0.01
TPM3P06753 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TPM3P06753 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TPM3P06753 AC106827.1-201ENST00000366454 431 ntBASIC15.1■□□□□ 0.01
TPM3P06753 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.1■□□□□ 0.01
TPM3P06753 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.1■□□□□ 0.01
TPM3P06753 YBX1P6-201ENST00000442962 1002 ntBASIC15.1■□□□□ 0.01
TPM3P06753 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 KRT8P1-201ENST00000557533 1207 ntBASIC15.1■□□□□ 0.01
TPM3P06753 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 BNIP3P13-201ENST00000599968 566 ntBASIC15.1■□□□□ 0.01
TPM3P06753 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.1■□□□□ 0.01
TPM3P06753 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 AC067931.2-201ENST00000623655 2003 ntBASIC15.1■□□□□ 0.01
TPM3P06753 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC15.1■□□□□ 0.01
TPM3P06753 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC15.1■□□□□ 0.01
TPM3P06753 EGLN3-205ENST00000547327 2849 ntBASIC15.1■□□□□ 0.01
TPM3P06753 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TPM3P06753 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms