Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
POLR3DP05423 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.05■□□□□ 0.16
POLR3DP05423 DNM1P51-201ENST00000558149 522 ntBASIC16.05■□□□□ 0.16
POLR3DP05423 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 ABHD17AP9-201ENST00000561925 548 ntBASIC16.05■□□□□ 0.16
POLR3DP05423 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC16.05■□□□□ 0.16
POLR3DP05423 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
POLR3DP05423 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC16.05■□□□□ 0.16
POLR3DP05423 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.05■□□□□ 0.16
POLR3DP05423 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
POLR3DP05423 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
POLR3DP05423 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR3DP05423 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR3DP05423 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
POLR3DP05423 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 AC102953.2-201ENST00000609755 3026 ntBASIC16.04■□□□□ 0.16
POLR3DP05423 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.04■□□□□ 0.16
POLR3DP05423 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 AC136604.1-202ENST00000425471 771 ntBASIC16.04■□□□□ 0.16
POLR3DP05423 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.04■□□□□ 0.16
POLR3DP05423 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 AC083801.1-201ENST00000491689 358 ntBASIC16.04■□□□□ 0.16
POLR3DP05423 NDUFB2P1-201ENST00000506966 295 ntBASIC16.04■□□□□ 0.16
POLR3DP05423 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.04■□□□□ 0.16
POLR3DP05423 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 AC012531.1-201ENST00000562848 2680 ntBASIC16.04■□□□□ 0.16
POLR3DP05423 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
POLR3DP05423 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC16.04■□□□□ 0.16
POLR3DP05423 GBAP1-208ENST00000566701 1546 ntBASIC16.04■□□□□ 0.16
POLR3DP05423 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.04■□□□□ 0.16
POLR3DP05423 PCDHB18P-202ENST00000526308 3197 ntBASIC16.03■□□□□ 0.16
POLR3DP05423 Z82170.1-201ENST00000625081 3192 ntBASIC16.03■□□□□ 0.16
POLR3DP05423 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC16.03■□□□□ 0.16
POLR3DP05423 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC16.03■□□□□ 0.16
POLR3DP05423 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
POLR3DP05423 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
POLR3DP05423 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
POLR3DP05423 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.03■□□□□ 0.16
POLR3DP05423 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms