Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 KIAA1324-203ENST00000369939 3442 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 KATNBL1P4-201ENST00000503545 918 ntBASIC13.17□□□□□ -0.3
RNF217Q8TC41 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AC009118.3-201ENST00000622896 873 ntBASIC13.17□□□□□ -0.3
RNF217Q8TC41 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 AC009452.1-201ENST00000640823 606 ntBASIC13.17□□□□□ -0.3
RNF217Q8TC41 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNF217Q8TC41 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF217Q8TC41 LAP3P2-201ENST00000454686 1454 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC136604.1-202ENST00000425471 771 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC084262.1-201ENST00000567818 751 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC005962.1-201ENST00000584100 773 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AL359881.2-201ENST00000602973 570 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AL512343.1-201ENST00000605837 169 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC006213.5-201ENST00000619673 288 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms