Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 OR7E155P-201ENST00000412208 1014 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 VDAC1P11-201ENST00000458323 852 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AC087203.1-201ENST00000532111 1181 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AC138466.5-201ENST00000624002 808 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AC092903.1-201ENST00000466506 262 ntBASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AC012146.4-201ENST00000575546 271 ntBASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO3Q8TAP4 KRT8P38-201ENST00000441370 1430 ntBASIC14.24□□□□□ -0.13
LMO3Q8TAP4 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms