Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.62□□□□□ -0.07
CASP4P49662 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CASP4P49662 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CASP4P49662 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CASP4P49662 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CASP4P49662 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CASP4P49662 AIFM1P1-201ENST00000413342 1841 ntBASIC14.62□□□□□ -0.07
CASP4P49662 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP4P49662 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP4P49662 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP4P49662 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CASP4P49662 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.61□□□□□ -0.07
CASP4P49662 LDHBP1-201ENST00000455730 1119 ntBASIC14.61□□□□□ -0.07
CASP4P49662 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
CASP4P49662 AC008267.1-201ENST00000474858 1069 ntBASIC14.61□□□□□ -0.07
CASP4P49662 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.61□□□□□ -0.07
CASP4P49662 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC14.61□□□□□ -0.07
CASP4P49662 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 MIR5572-201ENST00000583188 137 ntBASIC14.61□□□□□ -0.07
CASP4P49662 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP4P49662 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP4P49662 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 AC091181.1-201ENST00000623762 2098 ntBASIC14.61□□□□□ -0.07
CASP4P49662 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CASP4P49662 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP4P49662 AC018445.4-201ENST00000624066 2291 ntBASIC14.61□□□□□ -0.07
CASP4P49662 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP4P49662 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP4P49662 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP4P49662 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CASP4P49662 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 AC012362.1-201ENST00000434906 739 ntBASIC14.6□□□□□ -0.07
CASP4P49662 RPE-208ENST00000436630 1128 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP4P49662 FAM213AP2-201ENST00000521579 683 ntBASIC14.6□□□□□ -0.07
CASP4P49662 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP4P49662 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP4P49662 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 AP000553.2-201ENST00000609038 441 ntBASIC14.6□□□□□ -0.07
CASP4P49662 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CASP4P49662 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 LINC00643-207ENST00000637212 734 ntBASIC14.6□□□□□ -0.07
CASP4P49662 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP4P49662 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CASP4P49662 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP4P49662 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms