Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
NACAE9PAV3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
NACAE9PAV3 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
NACAE9PAV3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
NACAE9PAV3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ISCA2P1-201ENST00000425548 448 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 FGFR3P1-201ENST00000449999 601 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 DUTP3-201ENST00000450025 415 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 NOC2LP1-201ENST00000450578 752 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 LDHBP1-201ENST00000455730 1119 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 IQSEC3P1-201ENST00000538799 536 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 AC007336.3-201ENST00000623886 2160 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC9.97□□□□□ -0.81
NACAE9PAV3 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
NACAE9PAV3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AP000358.1-201ENST00000456260 156 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC9.97□□□□□ -0.81
NACAE9PAV3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AC006453.1-201ENST00000636037 1257 ntBASIC9.97□□□□□ -0.81
NACAE9PAV3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
NACAE9PAV3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC9.97□□□□□ -0.81
NACAE9PAV3 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC9.97□□□□□ -0.81
NACAE9PAV3 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC9.96□□□□□ -0.81
NACAE9PAV3 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms