Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC018638.5-201ENST00000450885 754 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 RPL18AP3-201ENST00000462885 528 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 MRPL22P1-201ENST00000505398 616 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 AC073862.5-201ENST00000624129 2027 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 AC026271.4-201ENST00000578214 1833 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 ZNF493-208ENST00000599461 1769 ntBASIC13.94□□□□□ -0.18
SCG3Q8WXD2 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCG3Q8WXD2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 FAM90A11P-201ENST00000518378 2218 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 COQ10BP2-201ENST00000513804 724 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 OR5BD1P-201ENST00000532527 817 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 MIR3940-201ENST00000579148 102 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 MIR3180-2-201ENST00000581748 88 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 RPL17P45-201ENST00000586289 509 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 AC107464.3-201ENST00000609172 737 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 KRT8P43-201ENST00000406052 1458 ntBASIC13.93□□□□□ -0.18
SCG3Q8WXD2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCG3Q8WXD2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 AGGF1P10-201ENST00000635005 2191 ntBASIC13.92□□□□□ -0.18
SCG3Q8WXD2 GHET1-201ENST00000627071 1906 ntBASIC13.92□□□□□ -0.18
SCG3Q8WXD2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 MAPK10-262ENST00000641051 5738 ntBASIC13.92□□□□□ -0.18
SCG3Q8WXD2 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCG3Q8WXD2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms